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  5. Cre06.g261450

Cre06.g261450


No description available


Gene families : OG0000591 (Archaeplastida) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g261450
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00240750 evm_27.TU.AmTr_v1... High mobility group B protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G20696 NFD03, HMGB3, NFD3 high mobility group B3 0.06 Archaeplastida
AT2G17560 NFD4, HMGB4, NFD04 high mobility group B4 0.1 Archaeplastida
AT5G23420 HMGB6 high-mobility group box 6 0.04 Archaeplastida
Cpa|evm.model.tig00000663.58 No alias No description available 0.05 Archaeplastida
GSVIVT01021424001 No alias High mobility group B protein 14 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01034361001 No alias High mobility group B protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_05796 No alias High mobility group B protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_32435 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_34784 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g01100.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g37910.1 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 99.4) 0.06 Archaeplastida
MA_72555g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86565g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_92600g0020 No alias No annotation 0.02 Archaeplastida
Pp3c17_7580V3.1 No alias high mobility group B3 0.03 Archaeplastida
Solyc04g008820.3.1 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e024274_P002 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e034918_P002 No alias HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 112.0) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 61 128
No external refs found!