1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g264350

Cre06.g264350


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL13 component


Gene families : OG0002028 (Archaeplastida) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g264350
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00228230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 Archaeplastida
AT1G78630 emb1473 Ribosomal protein L13 family protein 0.16 Archaeplastida
Cpa|evm.model.tig00020912.24 No alias 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre09.g405200 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
GSVIVT01014101001 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
Gb_28095 No alias component psRPL13 of large ribosomal subunit proteome 0.14 Archaeplastida
LOC_Os01g54540.1 No alias component psRPL13 of large ribosomal subunit proteome 0.17 Archaeplastida
MA_10433400g0010 No alias component psRPL13 of large ribosomal subunit proteome 0.12 Archaeplastida
Mp3g07030.1 No alias component psRPL13 of large ribosomal subunit proteome 0.27 Archaeplastida
Pp3c1_3220V3.1 No alias Ribosomal protein L13 family protein 0.03 Archaeplastida
Pp3c20_2980V3.1 No alias Ribosomal protein L13 family protein 0.24 Archaeplastida
Pp3c24_18330V3.1 No alias Ribosomal protein L13 family protein 0.06 Archaeplastida
Smo7665 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Solyc07g062190.4.1 No alias component psRPL13 of large ribosomal subunit proteome 0.19 Archaeplastida
Solyc09g092090.4.1 No alias component mtRPL13 of large ribosomal subunit proteome 0.03 Archaeplastida
Solyc12g014390.3.1 No alias component psRPL13 of large ribosomal subunit proteome 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034311 diol metabolic process IEP Neighborhood
BP GO:0034312 diol biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 75 200
No external refs found!