Description : Chromatin organisation.histones.H2B-type histone
Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre06.g265400 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00085300 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.01 | Archaeplastida | |
AMTR_s00012p00088340 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
AT3G46030 | HTB11 | Histone superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01016164001 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
GSVIVT01025021001 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
GSVIVT01025025001 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
Gb_12082 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Gb_26315 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Gb_32754 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
LOC_Os01g05630.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os01g05900.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os03g17084.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os05g49860.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os08g38300.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
MA_10435143g0010 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
MA_10435143g0020 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
MA_17795g0010 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
MA_38565g0010 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
MA_9293473g0010 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
Mp6g04070.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Pp3c12_7610V3.1 | No alias | Histone superfamily protein | 0.02 | Archaeplastida | |
Pp3c17_15780V3.1 | No alias | Histone superfamily protein | 0.02 | Archaeplastida | |
Solyc02g038690.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc06g005390.1.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
Solyc06g074790.2.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc06g075800.1.1 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
Solyc11g007920.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc11g007930.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc11g066430.2.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e004028_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e016882_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e020484_P002 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e022201_P001 | No alias | histone (H2B) | 0.01 | Archaeplastida | |
Zm00001e023342_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e027803_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Neighborhood |
MF | GO:0003847 | 1-alkyl-2-acetylglycerophosphocholine esterase activity | IEP | Neighborhood |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Neighborhood |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Neighborhood |
BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Neighborhood |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 6 | 129 |
No external refs found! |