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  5. Cre06.g266416

Cre06.g266416


Description : DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g266416
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00230510 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 Archaeplastida
AMTR_s00032p00104970 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G06670 NIH nuclear DEIH-boxhelicase 0.02 Archaeplastida
AT1G58060 No alias RNA helicase family protein 0.02 Archaeplastida
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.02 Archaeplastida
Cpa|evm.model.tig00021094.26 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_05411 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 Archaeplastida
Gb_13707 No alias DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os03g53760.1 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os10g33275.1 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10435499g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_177779g0010 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.01 Archaeplastida
MA_291146g0010 No alias DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 Archaeplastida
Pp3c11_11510V3.1 No alias helicase in vascular tissue and tapetum 0.01 Archaeplastida
Pp3c14_12310V3.1 No alias RNA helicase family protein 0.02 Archaeplastida
Pp3c26_14400V3.1 No alias RNA helicase family protein 0.02 Archaeplastida
Pp3c2_32730V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.02 Archaeplastida
Solyc01g006970.4.1 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g007510.4.1 No alias DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.02 Archaeplastida
Zm00001e004608_P001 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Neighborhood
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 559 648
IPR001650 Helicase_C 280 417
IPR011709 DUF1605 756 846
No external refs found!