Cre06.g266650

Description : Chromatin organisation.histones.H3-type histone

Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g266650
Cluster	HCCA: Cluster_40

Arabidopsis thalianaTarget	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00237320	No alias	Chromatin organisation.histones.H3-type histone	0.03	Archaeplastida
AMTR_s00018p00168040	No alias	Chromatin organisation.histones.H3-type histone	0.07	Archaeplastida
AMTR_s00030p00044250	No alias	Chromatin organisation.histones.H3-type histone	0.04	Archaeplastida
AT1G09200	No alias	Histone superfamily protein	0.04	Archaeplastida
AT1G19890	ATMGH3, MGH3	male-gamete-specific histone H3	0.01	Archaeplastida
AT3G27360	No alias	Histone superfamily protein	0.06	Archaeplastida
AT5G10390	No alias	Histone superfamily protein	0.06	Archaeplastida
AT5G10400	No alias	Histone superfamily protein	0.06	Archaeplastida
AT5G65360	No alias	Histone superfamily protein	0.04	Archaeplastida
Cre06.g265500	No alias	Chromatin organisation.histones.H3-type histone	0.04	Archaeplastida
Cre16.g650300	No alias	Chromatin organisation.histones.H3-type histone	0.07	Archaeplastida
Cre17.g709050	No alias	Chromatin organisation.histones.H3-type histone	0.33	Archaeplastida
GSVIVT01025316001	No alias	Histone H3.2 OS=Pisum sativum	0.04	Archaeplastida
GSVIVT01025318001	No alias	Histone H3.2 OS=Pisum sativum	0.09	Archaeplastida
GSVIVT01026582001	No alias	Histone H3.2 OS=Pisum sativum	0.04	Archaeplastida
GSVIVT01027073001	No alias	Cell cycle.mitosis and meiosis.chromosome...	0.11	Archaeplastida
GSVIVT01032047001	No alias	Histone H3 OS=Volvox carteri	0.06	Archaeplastida
GSVIVT01034510001	No alias	Histone H3.2 OS=Pisum sativum	0.14	Archaeplastida
Gb_08475	No alias	histone (H3)	0.05	Archaeplastida
Gb_15586	No alias	histone (H3)	0.06	Archaeplastida
Gb_19430	No alias	histone (H3)	0.07	Archaeplastida
Gb_27618	No alias	histone (H3)	0.1	Archaeplastida
Gb_29026	No alias	histone (H3)	0.06	Archaeplastida
Gb_29027	No alias	histone (H3)	0.04	Archaeplastida
Gb_30564	No alias	histone (H3)	0.33	Archaeplastida
Gb_36661	No alias	histone (H3)	0.14	Archaeplastida
Gb_40804	No alias	histone (H3)	0.14	Archaeplastida
LOC_Os01g64640.1	No alias	histone (H3)	0.11	Archaeplastida
LOC_Os02g25910.1	No alias	histone (H3)	0.02	Archaeplastida
LOC_Os03g27310.2	No alias	histone (H3)	0.06	Archaeplastida
LOC_Os04g34240.1	No alias	histone (H3)	0.07	Archaeplastida
LOC_Os05g36280.1	No alias	histone (H3)	0.15	Archaeplastida
LOC_Os05g41080.1	No alias	histone H3 variant (CENH3)	0.06	Archaeplastida
LOC_Os06g04030.1	No alias	histone (H3)	0.07	Archaeplastida
LOC_Os06g06460.1	No alias	histone (H3)	0.05	Archaeplastida
LOC_Os06g06480.1	No alias	histone (H3)	0.02	Archaeplastida
LOC_Os06g06510.1	No alias	histone (H3)	0.04	Archaeplastida
LOC_Os11g05730.1	No alias	histone (H3)	0.1	Archaeplastida
MA_10432805g0020	No alias	histone (H3)	0.07	Archaeplastida
MA_113838g0010	No alias	histone (H3)	0.18	Archaeplastida
MA_125055g0020	No alias	Histone H3.2 OS=Cichorium intybus (sp\|q5mya4\|h32_cicin : 122.0)	0.17	Archaeplastida
MA_1527811g0010	No alias	No annotation	0.1	Archaeplastida
MA_17527g0010	No alias	histone (H3)	0.1	Archaeplastida
MA_197719g0010	No alias	histone (H3)	0.06	Archaeplastida
MA_210354g0010	No alias	histone (H3)	0.17	Archaeplastida
MA_222556g0010	No alias	Histone H3.2 OS=Lilium longiflorum (sp\|q402e1\|h32_lillo : 116.0)	0.08	Archaeplastida
MA_24261g0010	No alias	histone (H3)	0.05	Archaeplastida
MA_350032g0010	No alias	histone (H3)	0.03	Archaeplastida
MA_356208g0010	No alias	histone (H3)	0.27	Archaeplastida
MA_475294g0010	No alias	histone (H3)	0.03	Archaeplastida
MA_561217g0010	No alias	histone (H3)	0.15	Archaeplastida
MA_56411g0010	No alias	histone (H3)	0.04	Archaeplastida
MA_74555g0010	No alias	Histone H3.2 OS=Pisum sativum (sp\|p68427\|h32_pea : 98.2)	0.06	Archaeplastida
MA_871602g0010	No alias	no hits & (original description: none)	0.12	Archaeplastida
Mp3g07730.1	No alias	histone (H3)	0.03	Archaeplastida
Mp3g09090.1	No alias	histone (H3)	0.08	Archaeplastida
Mp3g22050.1	No alias	histone H3 variant (CENH3)	0.03	Archaeplastida
Mp7g10730.1	No alias	histone (H3)	0.04	Archaeplastida
Mp7g16200.1	No alias	histone (H3)	0.03	Archaeplastida
Mp7g18030.1	No alias	histone (H3)	0.04	Archaeplastida
Pp3c18_12300V3.1	No alias	Histone superfamily protein	0.01	Archaeplastida
Pp3c18_14470V3.1	No alias	Histone superfamily protein	0.03	Archaeplastida
Pp3c18_14481V3.1	No alias	Histone superfamily protein	0.07	Archaeplastida
Pp3c1_20670V3.1	No alias	Histone superfamily protein	0.06	Archaeplastida
Pp3c22_8680V3.1	No alias	Histone superfamily protein	0.01	Archaeplastida
Pp3c23_15100V3.1	No alias	Histone superfamily protein	0.17	Archaeplastida
Pp3c24_11100V3.1	No alias	Histone superfamily protein	0.06	Archaeplastida
Pp3c24_13230V3.1	No alias	Histone superfamily protein	0.11	Archaeplastida
Pp3c8_2810V3.1	No alias	Histone superfamily protein	0.09	Archaeplastida
Smo103546	No alias	Chromatin organisation.histones.H3-type histone	0.02	Archaeplastida
Smo171192	No alias	Cell cycle.mitosis and meiosis.chromosome...	0.02	Archaeplastida
Smo176603	No alias	Chromatin organisation.histones.H3-type histone	0.06	Archaeplastida
Smo269004	No alias	Chromatin organisation.histones.H3-type histone	0.02	Archaeplastida
Smo438193	No alias	Chromatin organisation.histones.H3-type histone	0.03	Archaeplastida
Smo78992	No alias	Chromatin organisation.histones.H3-type histone	0.03	Archaeplastida
Solyc01g074000.3.1	No alias	histone (H3)	0.12	Archaeplastida
Solyc01g079110.4.1	No alias	histone (H3)	0.05	Archaeplastida
Solyc01g080600.4.1	No alias	histone (H3)	0.07	Archaeplastida
Solyc01g086820.4.1	No alias	histone (H3)	0.06	Archaeplastida
Solyc02g077480.1.1	No alias	histone (H3)	0.09	Archaeplastida
Solyc05g051500.4.1	No alias	histone (H3)	0.06	Archaeplastida
Solyc10g008910.1.1	No alias	histone (H3)	0.18	Archaeplastida
Solyc11g010230.2.1	No alias	histone (H3)	0.07	Archaeplastida
Solyc12g056540.1.1	No alias	histone (H3)	0.12	Archaeplastida
Zm00001e008155_P001	No alias	histone (H3)	0.18	Archaeplastida
Zm00001e008160_P001	No alias	histone (H3)	0.05	Archaeplastida
Zm00001e014760_P001	No alias	histone (H3)	0.07	Archaeplastida
Zm00001e016861_P001	No alias	histone (H3)	0.07	Archaeplastida
Zm00001e018263_P001	No alias	histone (H3)	0.03	Archaeplastida
Zm00001e019170_P001	No alias	histone (H3)	0.06	Archaeplastida
Zm00001e029901_P001	No alias	histone (H3)	0.03	Archaeplastida
Zm00001e036599_P001	No alias	histone (H3)	0.08	Archaeplastida
Zm00001e040856_P001	No alias	histone (H3)	0.11	Archaeplastida
Zm00001e040876_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	1	131

External Links

No external refs found!

Cre06.g266650

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation