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  5. Cre06.g266900

Cre06.g266900


Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002684 (Archaeplastida) Phylogenetic Tree(s): OG0002684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g266900
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 Archaeplastida
AMTR_s00045p00200960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AT1G02910 LPA1 tetratricopeptide repeat (TPR)-containing protein 0.03 Archaeplastida
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 Archaeplastida
GSVIVT01027972001 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
GSVIVT01028479001 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.01 Archaeplastida
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.03 Archaeplastida
MA_10430747g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_173127g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 Archaeplastida
MA_8804338g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 Archaeplastida
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 Archaeplastida
Pp3c17_23380V3.1 No alias tetratricopeptide repeat (TPR)-containing protein 0.03 Archaeplastida
Smo134250 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Solyc09g063140.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g074880.4.1 No alias No annotation 0.03 Archaeplastida
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042816 vitamin B6 metabolic process IEP Neighborhood
BP GO:0042819 vitamin B6 biosynthetic process IEP Neighborhood
BP GO:0042822 pyridoxal phosphate metabolic process IEP Neighborhood
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Neighborhood
BP GO:0046184 aldehyde biosynthetic process IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021883 LPA1-like 61 136
No external refs found!