Cre06.g267500

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-3 component

Gene families : OG0003815 (Archaeplastida) Phylogenetic Tree(s): OG0003815_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g267500
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00168080	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.02	Archaeplastida
AT1G21720	PBC1	proteasome beta subunit C1	0.2	Archaeplastida
AT1G77440	PBC2	20S proteasome beta subunit C2	0.1	Archaeplastida
Cpa\|evm.model.tig00000826.22	No alias	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida
GSVIVT01008836001	No alias	Protein degradation.26S proteasome.20S core...	0.18	Archaeplastida
Gb_09326	No alias	component beta type-3 of 26S proteasome	0.03	Archaeplastida
Gb_29749	No alias	component beta type-3 of 26S proteasome	0.05	Archaeplastida
LOC_Os02g08520.1	No alias	component beta type-3 of 26S proteasome	0.06	Archaeplastida
LOC_Os06g43570.1	No alias	component beta type-3 of 26S proteasome	0.15	Archaeplastida
MA_549126g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_70161g0010	No alias	component beta type-3 of 26S proteasome	0.07	Archaeplastida
Mp7g15370.1	No alias	component beta type-3 of 26S proteasome	0.13	Archaeplastida
Pp3c7_520V3.1	No alias	proteasome beta subunit C1	0.09	Archaeplastida
Smo266913	No alias	Protein degradation.26S proteasome.20S core...	0.03	Archaeplastida
Solyc04g009410.3.1	No alias	component beta type-3 of 26S proteasome	0.18	Archaeplastida
Zm00001e013846_P001	No alias	component beta type-3 of 26S proteasome	0.1	Archaeplastida
Zm00001e030465_P001	No alias	component beta type-3 of 26S proteasome	0.1	Archaeplastida
Zm00001e037487_P001	No alias	component beta type-3 of 26S proteasome	0.21	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
BP	GO:0006289	nucleotide-excision repair	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0010498	proteasomal protein catabolic process	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0030163	protein catabolic process	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood
CC	GO:1905369	endopeptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	5	155

External Links

No external refs found!