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  5. AMTR_s00049p00109000

AMTR_s00049p00109000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.83

No description available


Gene families : OG0002053 (Archaeplastida) Phylogenetic Tree(s): OG0002053_tree ,
OG_05_0001349 (LandPlants) Phylogenetic Tree(s): OG_05_0001349_tree ,
OG_06_0001393 (SeedPlants) Phylogenetic Tree(s): OG_06_0001393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00109000
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010339001 No alias No description available 0.05 Archaeplastida
LOC_Os02g02500.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_121354g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_173856g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g17160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g014710.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022735_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025360_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005516 Remorin_C 227 334
No external refs found!