Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS18 component
Gene families : OG0001796 (Archaeplastida) Phylogenetic Tree(s): OG0001796_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre06.g272950 | |
Cluster | HCCA: Cluster_100 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00178430 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.31 | Archaeplastida | |
AMTR_s00142p00099380 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | Archaeplastida | |
AT1G22780 | RPS18A, PFL, PFL1 | Ribosomal protein S13/S18 family | 0.27 | Archaeplastida | |
AT1G34030 | No alias | Ribosomal protein S13/S18 family | 0.22 | Archaeplastida | |
AT4G09800 | RPS18C | S18 ribosomal protein | 0.29 | Archaeplastida | |
GSVIVT01017975001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.35 | Archaeplastida | |
GSVIVT01034582001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
Gb_21599 | No alias | component RPS18 of SSU proteome | 0.01 | Archaeplastida | |
Gb_28114 | No alias | component RPS18 of SSU proteome | 0.01 | Archaeplastida | |
LOC_Os03g58050.1 | No alias | component RPS18 of SSU proteome | 0.45 | Archaeplastida | |
LOC_Os07g07709.1 | No alias | component RPS18 of SSU proteome | 0.07 | Archaeplastida | |
MA_10429265g0010 | No alias | component RPS18 of SSU proteome | 0.34 | Archaeplastida | |
MA_10431843g0010 | No alias | component RPS18 of SSU proteome | 0.17 | Archaeplastida | |
Mp1g07420.1 | No alias | component RPS18 of SSU proteome | 0.45 | Archaeplastida | |
Mp5g02820.1 | No alias | component RPS18 of SSU proteome | 0.5 | Archaeplastida | |
Pp3c16_2090V3.1 | No alias | Ribosomal protein S13/S18 family | 0.51 | Archaeplastida | |
Pp3c25_1240V3.1 | No alias | Ribosomal protein S13/S18 family | 0.41 | Archaeplastida | |
Pp3c25_1430V3.1 | No alias | Ribosomal protein S13/S18 family | 0.57 | Archaeplastida | |
Pp3c5_2800V3.1 | No alias | Ribosomal protein S13/S18 family | 0.1 | Archaeplastida | |
Pp3c6_21770V3.1 | No alias | Ribosomal protein S13/S18 family | 0.46 | Archaeplastida | |
Pp3c6_21830V3.1 | No alias | Ribosomal protein S13/S18 family | 0.09 | Archaeplastida | |
Smo267619 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
Solyc03g078290.3.1 | No alias | component RPS18 of SSU proteome | 0.41 | Archaeplastida | |
Solyc06g073370.4.1 | No alias | component RPS18 of SSU proteome | 0.29 | Archaeplastida | |
Solyc11g005680.2.1 | No alias | component RPS18 of SSU proteome | 0.23 | Archaeplastida | |
Zm00001e005967_P001 | No alias | component RPS18 of SSU proteome | 0.51 | Archaeplastida | |
Zm00001e011880_P001 | No alias | component RPS18 of SSU proteome | 0.47 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001892 | Ribosomal_S13 | 15 | 142 |
No external refs found! |