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  5. Cre06.g278197

Cre06.g278197


Description : Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana


Gene families : OG0001011 (Archaeplastida) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278197
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00238470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AT4G33620 No alias Cysteine proteinases superfamily protein 0.01 Archaeplastida
Cpa|evm.model.tig00001234.8 No alias Probable ubiquitin-like-specific protease 2A... 0.01 Archaeplastida
GSVIVT01020235001 No alias Protein degradation.peptidase families.cysteine-type... 0.01 Archaeplastida
LOC_Os06g29310.1 No alias protease (OTS) 0.01 Archaeplastida
LOC_Os12g41380.1 No alias protease (OTS) 0.03 Archaeplastida
MA_10435078g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.02 Archaeplastida
Pp3c17_2400V3.1 No alias Cysteine proteinases superfamily protein 0.01 Archaeplastida
Pp3c25_3200V3.1 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
Pp3c9_4420V3.1 No alias UB-like protease 1D 0.02 Archaeplastida
Pp3c9_9860V3.1 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
Smo439571 No alias Protein degradation.peptidase families.cysteine-type... 0.01 Archaeplastida
Solyc11g017040.2.1 No alias protease (SPF) 0.03 Archaeplastida
Zm00001e025272_P005 No alias protease (OTS) 0.02 Archaeplastida
Zm00001e028717_P001 No alias protease (SPF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 423 685
No external refs found!