Cre06.g280850


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component


Gene families : OG0005707 (Archaeplastida) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g280850
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00154550 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
AT1G56450 PBG1 20S proteasome beta subunit G1 0.19 Archaeplastida
Cpa|evm.model.tig00000808.43 No alias Protein degradation.26S proteasome.20S core... 0.2 Archaeplastida
GSVIVT01025150001 No alias Protein degradation.26S proteasome.20S core... 0.18 Archaeplastida
LOC_Os09g33986.1 No alias component beta type-7 of 26S proteasome 0.04 Archaeplastida
MA_10427481g0010 No alias component beta type-7 of 26S proteasome 0.11 Archaeplastida
Mp6g01810.1 No alias component beta type-7 of 26S proteasome 0.16 Archaeplastida
Pp3c18_13650V3.1 No alias 20S proteasome beta subunit G1 0.03 Archaeplastida
Pp3c26_11210V3.1 No alias 20S proteasome beta subunit G1 0.02 Archaeplastida
Smo271646 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc11g069150.3.1 No alias component beta type-7 of 26S proteasome 0.19 Archaeplastida
Zm00001e010160_P002 No alias component beta type-7 of 26S proteasome 0.13 Archaeplastida
Zm00001e034696_P001 No alias component beta type-7 of 26S proteasome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 67 251
No external refs found!