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  5. Cre06.g281050

Cre06.g281050


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.SNX1 component


Gene families : OG0003854 (Archaeplastida) Phylogenetic Tree(s): OG0003854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g281050
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Zm00001e019193_P002 No alias component SNX1 of Retromer protein recycling complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001683 Phox 29 140
IPR015404 Vps5_C 175 383
No external refs found!