Cre06.g282200


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001223 (Archaeplastida) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g282200
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00189660 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
GSVIVT01015258001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
GSVIVT01016913001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Gb_07473 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
LOC_Os06g40620.2 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
LOC_Os09g09480.2 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 Archaeplastida
MA_10435786g0010 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
MA_216716g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_62922g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
Pp3c12_22980V3.1 No alias SNF7 family protein 0.01 Archaeplastida
Pp3c3_36260V3.1 No alias SNF7 family protein 0.01 Archaeplastida
Pp3c4_3530V3.1 No alias SNF7 family protein 0.02 Archaeplastida
Solyc05g026050.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
Zm00001e024016_P002 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e027871_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
Zm00001e037444_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003911 DNA ligase (NAD+) activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 30 210
No external refs found!