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  5. AMTR_s00049p00178220

AMTR_s00049p00178220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.171

No description available


Gene families : OG0006462 (Archaeplastida) Phylogenetic Tree(s): OG0006462_tree ,
OG_05_0004446 (LandPlants) Phylogenetic Tree(s): OG_05_0004446_tree ,
OG_06_0003080 (SeedPlants) Phylogenetic Tree(s): OG_06_0003080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00178220
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00204870 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00024p00202820 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00045p00158480 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00077p00120590 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00116p00138190 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00667p00011980 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!