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  5. Cre06.g305200

Cre06.g305200


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0005457 (Archaeplastida) Phylogenetic Tree(s): OG0005457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g305200
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01012145001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_38566 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10435270g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c19_17160V3.1 No alias zinc finger (C2H2 type) family protein 0.02 Archaeplastida
Solyc02g032120.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc02g081620.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!