AMTR_s00049p00186050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.186

Description : Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0009426 (Archaeplastida) Phylogenetic Tree(s): OG0009426_tree ,
OG_05_0020495 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019695 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00186050
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267080 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g29760,... 0.08 Archaeplastida
AMTR_s00006p00257590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g08070,... 0.06 Archaeplastida
AMTR_s00058p00105900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g29230... 0.03 Archaeplastida
AMTR_s00522p00013410 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!