Description : Transcription initiation factor IIB OS=Glycine max

Gene families : OG0001457 (Archaeplastida) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre06.g310450
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G41630 TFIIB transcription factor IIB 0.04 Archaeplastida
Cpa|evm.model.tig00000663.43 No alias Transcription initiation factor IIB-2 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os09g36440.1 No alias basal transcription factor (TFIIb) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 109 180
IPR013137 Znf_TFIIB 6 46
No external refs found!