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  5. Cre06.g310700

Cre06.g310700


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component


Gene families : OG0002069 (Archaeplastida) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g310700
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00106300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
AMTR_s00077p00123980 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
AT3G23390 No alias Zinc-binding ribosomal protein family protein 0.07 Archaeplastida
AT4G14320 No alias Zinc-binding ribosomal protein family protein 0.31 Archaeplastida
Cpa|evm.model.tig00000489.11 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01012052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01032097001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 Archaeplastida
Gb_13148 No alias component RPL36a of LSU proteome component 0.08 Archaeplastida
Gb_34419 No alias component RPL36a of LSU proteome component 0.11 Archaeplastida
LOC_Os07g26740.1 No alias component RPL36a of LSU proteome component 0.04 Archaeplastida
LOC_Os07g33898.1 No alias component RPL36a of LSU proteome component 0.03 Archaeplastida
LOC_Os07g33997.1 No alias component RPL36a of LSU proteome component 0.03 Archaeplastida
MA_99845g0010 No alias component RPL36a of LSU proteome component 0.26 Archaeplastida
Mp2g25770.1 No alias component RPL36a of LSU proteome component 0.26 Archaeplastida
Pp3c26_11220V3.1 No alias Zinc-binding ribosomal protein family protein 0.22 Archaeplastida
Pp3c2_27320V3.1 No alias Zinc-binding ribosomal protein family protein 0.07 Archaeplastida
Pp3c3_10260V3.1 No alias Zinc-binding ribosomal protein family protein 0.22 Archaeplastida
Pp3c4_27290V3.1 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
Pp3c7_20120V3.1 No alias Zinc-binding ribosomal protein family protein 0.08 Archaeplastida
Smo161986 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Solyc03g112850.3.1 No alias component RPL36a of LSU proteome component 0.11 Archaeplastida
Zm00001e010489_P002 No alias component RPL36a of LSU proteome component 0.25 Archaeplastida
Zm00001e033410_P001 No alias component RPL36a of LSU proteome component 0.18 Archaeplastida
Zm00001e035123_P001 No alias component RPL36a of LSU proteome component 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 17 91
No external refs found!