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  5. AMTR_s00049p00200660

AMTR_s00049p00200660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.213

No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00200660
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00075930 No alias No description available 0.06 Archaeplastida
AMTR_s00036p00211050 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00091p00168090 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00193p00026850 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s02623p00006550 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 36 106
No external refs found!