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  5. Cre07.g325746

Cre07.g325746


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL38 component


Gene families : OG0004269 (Archaeplastida) Phylogenetic Tree(s): OG0004269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g325746
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G43460 No alias Ribosomal L38e protein family 0.1 Archaeplastida
AT3G59540 No alias Ribosomal L38e protein family 0.12 Archaeplastida
Cpa|evm.model.tig00021719.6 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01010854001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 Archaeplastida
GSVIVT01019051001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 Archaeplastida
Gb_16529 No alias component RPL38 of LSU proteome component 0.23 Archaeplastida
Gb_29252 No alias component RPL38 of LSU proteome component 0.15 Archaeplastida
LOC_Os11g24610.1 No alias component RPL38 of LSU proteome component 0.05 Archaeplastida
MA_20588g0010 No alias component RPL38 of LSU proteome component 0.25 Archaeplastida
Mp7g14520.1 No alias component RPL38 of LSU proteome component 0.07 Archaeplastida
Pp3c10_20240V3.1 No alias Ribosomal L38e protein family 0.35 Archaeplastida
Pp3c12_17990V3.1 No alias Ribosomal L38e protein family 0.21 Archaeplastida
Pp3c3_25640V3.1 No alias Ribosomal L38e protein family 0.3 Archaeplastida
Pp3c4_11700V3.1 No alias Ribosomal L38e protein family 0.35 Archaeplastida
Smo270247 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
Solyc05g055640.4.1 No alias component RPL38 of LSU proteome component 0.08 Archaeplastida
Solyc11g008510.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e003730_P001 No alias no hits & (original description: none) 0.28 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 69
No external refs found!