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  5. Cre07.g328400

Cre07.g328400


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component


Gene families : OG0006677 (Archaeplastida) Phylogenetic Tree(s): OG0006677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g328400
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
MA_10434282g0010 No alias component TAF15 of TFIId basal transcription regulation complex 0.02 Archaeplastida
Zm00001e010307_P004 No alias component TAF15 of TFIId basal transcription regulation complex 0.02 Archaeplastida
Zm00001e034916_P002 No alias component TAF15 of TFIId basal transcription regulation complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 18 92
IPR001876 Znf_RanBP2 324 351
IPR001876 Znf_RanBP2 165 193
No external refs found!