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  5. AMTR_s00049p00216010

AMTR_s00049p00216010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.248

No description available


Gene families : OG0000362 (Archaeplastida) Phylogenetic Tree(s): OG0000362_tree ,
OG_05_0000178 (LandPlants) Phylogenetic Tree(s): OG_05_0000178_tree ,
OG_06_0000495 (SeedPlants) Phylogenetic Tree(s): OG_06_0000495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00216010
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G11090 No alias serine-rich protein-related 0.03 Archaeplastida
GSVIVT01012865001 No alias No description available 0.03 Archaeplastida
GSVIVT01014741001 No alias No description available 0.04 Archaeplastida
Gb_04477 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_11274 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_27597 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_37466 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g55600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g20600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_103063g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_126512g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_18091g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_229862g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_519042g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7207868g0010 No alias No annotation 0.06 Archaeplastida
MA_75170g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_94560g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9485570g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_12730V3.1 No alias serine-rich protein-related 0.02 Archaeplastida
Pp3c17_13350V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_31440V3.1 No alias serine-rich protein-related 0.02 Archaeplastida
Pp3c1_8340V3.1 No alias serine-rich protein-related 0.03 Archaeplastida
Pp3c2_26650V3.1 No alias serine-rich protein-related 0.04 Archaeplastida
Solyc07g007330.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023673_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030551_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040161_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!