1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00049p00224950

AMTR_s00049p00224950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.268

No description available


Gene families : OG0001010 (Archaeplastida) Phylogenetic Tree(s): OG0001010_tree ,
OG_05_0043340 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0037861 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00224950
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00143100 evm_27.TU.AmTr_v1... Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa... 0.04 Archaeplastida
AT1G56280 DI19, ATDI19 drought-induced 19 0.03 Archaeplastida
AT5G49230 HRB1 Drought-responsive family protein 0.02 Archaeplastida
GSVIVT01031200001 No alias Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os01g48190.1 No alias Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os05g48800.2 No alias Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Smo405842 No alias Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa... 0.02 Archaeplastida
Solyc09g075510.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008598 Di19_Zn_binding_dom 1 127
No external refs found!