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  5. AMTR_s00049p00230810

AMTR_s00049p00230810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.280

Description : GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana


Gene families : OG0000359 (Archaeplastida) Phylogenetic Tree(s): OG0000359_tree ,
OG_05_0000183 (LandPlants) Phylogenetic Tree(s): OG_05_0000183_tree ,
OG_06_0001760 (SeedPlants) Phylogenetic Tree(s): OG_06_0001760_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00230810
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G14450 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
GSVIVT01000546001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032373001 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032473001 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_16234 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_27654 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g22640.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g04240.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10426064g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10426084g0030 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10435215g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_155037g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Mp1g22200.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g07250.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo90062 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 34 358
No external refs found!