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  5. Cre08.g358556

Cre08.g358556


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS29 component


Gene families : OG0004664 (Archaeplastida) Phylogenetic Tree(s): OG0004664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g358556
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G43980 No alias Ribosomal protein S14p/S29e family protein 0.02 Archaeplastida
AT3G44010 No alias Ribosomal protein S14p/S29e family protein 0.03 Archaeplastida
AT4G33865 No alias Ribosomal protein S14p/S29e family protein 0.04 Archaeplastida
GSVIVT01015056001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
LOC_Os03g56241.1 No alias component RPS29 of SSU proteome 0.05 Archaeplastida
LOC_Os11g41610.1 No alias component RPS29 of SSU proteome 0.07 Archaeplastida
LOC_Os12g32380.1 No alias component RPS29 of SSU proteome 0.07 Archaeplastida
MA_10436379g0010 No alias component RPS29 of SSU proteome 0.12 Archaeplastida
MA_336247g0010 No alias component RPS29 of SSU proteome 0.03 Archaeplastida
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.22 Archaeplastida
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.18 Archaeplastida
Pp3c10_7980V3.1 No alias Ribosomal protein S14p/S29e family protein 0.2 Archaeplastida
Pp3c14_10190V3.1 No alias Ribosomal protein S14p/S29e family protein 0.1 Archaeplastida
Pp3c2_6730V3.1 No alias Ribosomal protein S14p/S29e family protein 0.25 Archaeplastida
Smo171412 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
Solyc06g073430.4.1 No alias component RPS29 of SSU proteome 0.05 Archaeplastida
Solyc11g020877.1.1 No alias component RPS29 of SSU proteome 0.05 Archaeplastida
Zm00001e005832_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 55
No external refs found!