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  5. Cre08.g375084

Cre08.g375084


No description available


Gene families : OG0005856 (Archaeplastida) Phylogenetic Tree(s): OG0005856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g375084
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020233001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Pp3c16_19090V3.1 No alias splicing factor PWI domain-containing protein / RNA... 0.03 Archaeplastida
Solyc05g005620.4.1 No alias pre-mRNA splicing factor (RBM25) 0.02 Archaeplastida
Zm00001e004229_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002483 PWI_dom 689 755
IPR000504 RRM_dom 91 160
No external refs found!