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  5. Cre08.g383550

Cre08.g383550


No description available


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g383550
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Gb_29938 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
MA_1663g0020 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
MA_17715g0010 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.01 Archaeplastida
MA_779502g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.01 Archaeplastida
Solyc01g007000.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g077610.4.1 No alias U-box domain-containing protein 30 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 60 159
IPR020683 Ankyrin_rpt-contain_dom 182 275
IPR003613 Ubox_domain 462 529
No external refs found!