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  5. Cre09.g392350

Cre09.g392350


Description : Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g392350
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00013p00256900 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00061p00142700 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 Archaeplastida
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 Archaeplastida
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.01 Archaeplastida
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Archaeplastida
AT3G52380 PDE322, CP33 chloroplast RNA-binding protein 33 0.01 Archaeplastida
AT4G24770 ATRBP31, CP31,... 31-kDa RNA binding protein 0.01 Archaeplastida
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Archaeplastida
Cpa|evm.model.tig00000912.4 No alias No description available 0.02 Archaeplastida
GSVIVT01016195001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01027917001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.01 Archaeplastida
GSVIVT01032361001 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
GSVIVT01033666001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_29798 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.01 Archaeplastida
Gb_37522 No alias Organelle RRM domain-containing protein 1, chloroplastic... 0.01 Archaeplastida
LOC_Os02g57010.1 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
LOC_Os03g25960.1 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os07g06450.1 No alias RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os08g44290.1 No alias RNA editing factor (CP31) 0.01 Archaeplastida
MA_10428777g0010 No alias Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... 0.06 Archaeplastida
MA_10435787g0010 No alias Small RNA-binding protein 11, chloroplastic... 0.04 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Mp2g13800.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Mp3g24820.1 No alias RNA-binding protein CP31B, chloroplastic OS=Arabidopsis... 0.07 Archaeplastida
Mp8g03420.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Pp3c17_4050V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Archaeplastida
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.01 Archaeplastida
Solyc02g088790.3.1 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
Solyc03g111840.3.1 No alias RNA editing factor (CP31) 0.02 Archaeplastida
Solyc09g007850.3.1 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.01 Archaeplastida
Solyc10g051377.1.1 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Zm00001e012278_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Zm00001e016211_P001 No alias 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Zm00001e022086_P002 No alias RNA editing factor (CP31) 0.01 Archaeplastida
Zm00001e033010_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e033465_P001 No alias RNA editing factor (CP31) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 74
No external refs found!