- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana
Gene families : OG0001972 (Archaeplastida) Phylogenetic Tree(s): OG0001972_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre09.g396139 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c20_16510V3.1 | No alias | RNA helicase, putative | 0.01 | Archaeplastida | |
| Solyc08g077420.3.1 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Neighborhood |
| MF | GO:0004531 | deoxyribonuclease II activity | IEP | Neighborhood |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Neighborhood |
| MF | GO:0004659 | prenyltransferase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0008272 | sulfate transport | IEP | Neighborhood |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Neighborhood |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016889 | endodeoxyribonuclease activity, producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0018342 | protein prenylation | IEP | Neighborhood |
| MF | GO:0048038 | quinone binding | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| BP | GO:0072348 | sulfur compound transport | IEP | Neighborhood |
| BP | GO:0097354 | prenylation | IEP | Neighborhood |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |