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  5. AMTR_s00051p00106780

AMTR_s00051p00106780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00051.42

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0004328 (Archaeplastida) Phylogenetic Tree(s): OG0004328_tree ,
OG_05_0005697 (LandPlants) Phylogenetic Tree(s): OG_05_0005697_tree ,
OG_06_0007337 (SeedPlants) Phylogenetic Tree(s): OG_06_0007337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00051p00106780
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Mp6g20270.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida
Pp3c20_14740V3.1 No alias RabGAP/TBC domain-containing protein 0.03 Archaeplastida
Smo96534 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Zm00001e023352_P004 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0046417 chorismate metabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 401 628
IPR021935 DUF3548 113 195
No external refs found!