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  5. Cre09.g399907

Cre09.g399907


Description : DNA ligase 6 OS=Arabidopsis thaliana


Gene families : OG0002458 (Archaeplastida) Phylogenetic Tree(s): OG0002458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g399907
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Gb_02140 No alias SNM interstrand crosslink repair factor 0.02 Archaeplastida
LOC_Os09g26760.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc08g067250.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009882_P001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001660 SAM 423 475
No external refs found!