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  5. Cre09.g404350

Cre09.g404350


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO4 transport karyopherin


Gene families : OG0003466 (Archaeplastida) Phylogenetic Tree(s): OG0003466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g404350
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023507001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Gb_04408 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 Archaeplastida
LOC_Os10g33710.1 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 Archaeplastida
MA_10426884g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_16344g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c6_27570V3.1 No alias No annotation 0.02 Archaeplastida
Smo129863 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc12g027580.3.1 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 Archaeplastida
Zm00001e004578_P001 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!