AMTR_s00051p00191940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00051.78

Description : Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana


Gene families : OG0000727 (Archaeplastida) Phylogenetic Tree(s): OG0000727_tree ,
OG_05_0000525 (LandPlants) Phylogenetic Tree(s): OG_05_0000525_tree ,
OG_06_0003000 (SeedPlants) Phylogenetic Tree(s): OG_06_0003000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00051p00191940
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G09610 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
AT1G71690 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
AT2G15440 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
AT3G50220 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
AT5G67210 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.06 Archaeplastida
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.03 Archaeplastida
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.04 Archaeplastida
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g55640.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g47310.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.02 Archaeplastida
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g093090.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g110890.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g031950.1.1 No alias glucuronoxylan 4-O-methyltransferase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 95 274
No external refs found!