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  5. Cre10.g420400

Cre10.g420400


No description available


Gene families : OG0005467 (Archaeplastida) Phylogenetic Tree(s): OG0005467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g420400
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT3G05040 HST, HST1 ARM repeat superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00000523.41 No alias Protein HASTY 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021908001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
LOC_Os01g26160.1 No alias miRNA nuclear export factor (HASTY). XPO5... 0.02 Archaeplastida
MA_10436866g0010 No alias Protein HASTY 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_39570g0010 No alias Protein HASTY 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026304_P001 No alias miRNA nuclear export factor (HASTY). XPO5... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!