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  5. Cre10.g430950

Cre10.g430950


Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor


Gene families : OG0002451 (Archaeplastida) Phylogenetic Tree(s): OG0002451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g430950
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00116180 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
Cpa|evm.model.tig00000605.2 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.01 Archaeplastida
Cpa|evm.model.tig00020614.39 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01031756001 No alias Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_13099 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.02 Archaeplastida
Gb_22242 No alias Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_22245 No alias DNA repair and recombination protein RAD54 OS=Oryza... 0.05 Archaeplastida
LOC_Os02g52510.1 No alias chromatin remodeling factor (Rad54) 0.04 Archaeplastida
Mp6g06120.1 No alias chromatin remodeling factor (Rad54) 0.04 Archaeplastida
Solyc04g056410.3.1 No alias chromatin remodeling factor (Rad54) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 712 816
IPR000330 SNF2_N 357 647
No external refs found!