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  5. Cre10.g433100

Cre10.g433100


Description : Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica


Gene families : OG0006584 (Archaeplastida) Phylogenetic Tree(s): OG0006584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g433100
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Gb_36197 No alias GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Pp3c7_19740V3.1 No alias GTP1/OBG family protein 0.03 Archaeplastida
Solyc01g067530.3.1 No alias GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0000469 cleavage involved in rRNA processing IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR015349 GTP-bd_prot_GTP1/OBG_C 557 617
IPR006169 GTP1_OBG_dom 182 338
IPR006073 GTP_binding_domain 342 460
No external refs found!