Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor
Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre10.g435450 | |
Cluster | HCCA: Cluster_72 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00074220 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
AMTR_s00011p00253850 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
AT1G08000 | GATA10 | GATA transcription factor 10 | 0.02 | Archaeplastida | |
AT3G54810 | BME3-ZF, BME3, GATA8 | Plant-specific GATA-type zinc finger transcription... | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00020610.74 | No alias | No description available | 0.02 | Archaeplastida | |
GSVIVT01018951001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
LOC_Os02g56250.1 | No alias | transcription factor (GATA) | 0.01 | Archaeplastida | |
LOC_Os05g06340.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
LOC_Os06g37450.1 | No alias | transcription factor (GATA) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 380 | 414 |
No external refs found! |