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  5. AMTR_s00052p00145550

AMTR_s00052p00145550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00052.49

Description : GPN-loop GTPase QQT1 OS=Arabidopsis thaliana


Gene families : OG0000867 (Archaeplastida) Phylogenetic Tree(s): OG0000867_tree ,
OG_05_0020368 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0006186 (SeedPlants) Phylogenetic Tree(s): OG_06_0006186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00145550
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G15910 No alias XH/XS domain-containing protein 0.03 Archaeplastida
LOC_Os02g19130.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.03 Archaeplastida
LOC_Os03g39910.1 No alias Factor of DNA methylation 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!