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  5. AMTR_s00052p00156010

AMTR_s00052p00156010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00052.63

No description available


Gene families : OG0002009 (Archaeplastida) Phylogenetic Tree(s): OG0002009_tree ,
OG_05_0001708 (LandPlants) Phylogenetic Tree(s): OG_05_0001708_tree ,
OG_06_0001402 (SeedPlants) Phylogenetic Tree(s): OG_06_0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00156010
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AT3G47560 No alias alpha/beta-Hydrolases superfamily protein 0.05 Archaeplastida
Cre12.g535550 No alias No description available 0.02 Archaeplastida
MA_10428712g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009244 lipopolysaccharide core region biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046401 lipopolysaccharide core region metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!