Cre10.g454400

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase

Gene families : OG0002694 (Archaeplastida) Phylogenetic Tree(s): OG0002694_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g454400
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method	Actions
Smo403400	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
Solyc03g120000.3.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	551	592
IPR011422	BRAP2	201	240
IPR011422	BRAP2	449	495
IPR001607	Znf_UBP	604	663

External Links

No external refs found!

Cre10.g454400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation