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  5. Cre10.g456200

Cre10.g456200


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS24 component


Gene families : OG0002123 (Archaeplastida) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g456200
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00221450 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
AT3G04920 No alias Ribosomal protein S24e family protein 0.28 Archaeplastida
AT5G28060 No alias Ribosomal protein S24e family protein 0.21 Archaeplastida
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
GSVIVT01001167001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
GSVIVT01021860001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.31 Archaeplastida
Gb_38272 No alias component RPS24 of SSU proteome 0.27 Archaeplastida
LOC_Os01g52490.1 No alias component RPS24 of SSU proteome 0.15 Archaeplastida
LOC_Os02g13530.1 No alias component RPS24 of SSU proteome 0.23 Archaeplastida
LOC_Os06g36160.1 No alias component RPS24 of SSU proteome 0.16 Archaeplastida
MA_119841g0010 No alias component RPS24 of SSU proteome 0.19 Archaeplastida
Mp1g10680.1 No alias component RPS24 of SSU proteome 0.33 Archaeplastida
Pp3c12_10760V3.1 No alias Ribosomal protein S24e family protein 0.28 Archaeplastida
Pp3c12_10870V3.1 No alias Ribosomal protein S24e family protein 0.06 Archaeplastida
Pp3c13_22220V3.1 No alias Ribosomal protein S24e family protein 0.32 Archaeplastida
Pp3c3_19700V3.1 No alias Ribosomal protein S24e family protein 0.28 Archaeplastida
Pp3c4_16900V3.1 No alias Ribosomal protein S24e family protein 0.02 Archaeplastida
Smo227903 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Solyc01g097870.3.1 No alias component RPS24 of SSU proteome 0.2 Archaeplastida
Solyc06g084230.3.1 No alias component RPS24 of SSU proteome 0.14 Archaeplastida
Solyc09g065330.3.1 No alias component RPS24 of SSU proteome 0.09 Archaeplastida
Zm00001e014422_P002 No alias component RPS24 of SSU proteome 0.24 Archaeplastida
Zm00001e019937_P001 No alias component RPS24 of SSU proteome 0.2 Archaeplastida
Zm00001e028203_P001 No alias component RPS24 of SSU proteome 0.24 Archaeplastida
Zm00001e030668_P001 No alias component RPS24 of SSU proteome 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 26 103
No external refs found!