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Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre11.g467577 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00103080 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | Archaeplastida | |
| AT1G26310 | AGL10, CAL1, CAL | K-box region and MADS-box transcription factor family protein | 0.02 | Archaeplastida | |
| AT5G62165 | AGL42 | AGAMOUS-like 42 | 0.01 | Archaeplastida | |
| Gb_41550 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida | |
| LOC_Os02g49840.1 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida | |
| LOC_Os06g06750.1 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida | |
| LOC_Os07g01820.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Solyc03g114840.3.1 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
| MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
| CC | GO:0030289 | protein phosphatase 4 complex | IEP | Neighborhood |
| MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 51 |
| No external refs found! |