AMTR_s00053p00025460 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.9

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00053p00025460
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00171140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.04	Archaeplastida
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.04	Archaeplastida
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.04	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.04	Archaeplastida
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.03	Archaeplastida
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.05	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.02	Archaeplastida
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.06	Archaeplastida
AT4G01250	WRKY22, AtWRKY22	WRKY family transcription factor	0.07	Archaeplastida
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.02	Archaeplastida
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.03	Archaeplastida
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.03	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	Archaeplastida
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.03	Archaeplastida
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.03	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.04	Archaeplastida
GSVIVT01008046001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01010525001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01012682001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01015952001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01019419001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01019511001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01024624001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01026965001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01027069001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01028718001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01029265001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01029688001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01030258001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01030453001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01032662001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01035885001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_02625	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_05176	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_06156	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_08731	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Gb_23334	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25118	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Gb_39366	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g14440.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g53040.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g53260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os01g61080.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os02g53100.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g55080.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g58420.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g21950.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g51560.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g09020.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g27730.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.08	Archaeplastida
LOC_Os05g39720.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.05	Archaeplastida
LOC_Os05g40060.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g40080.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os07g02060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os08g13840.2	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os09g16510.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os09g25060.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os09g25070.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10425932g0020	No alias	transcription factor (WRKY)	0.07	Archaeplastida
MA_10428091g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10429098g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10432362g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10434651g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10434976g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10436051g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_114377g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.08	Archaeplastida
MA_2290g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_310991g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_4321850g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_49848g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_53351g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_558583g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_6177g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_7068293g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_88419g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp1g08960.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp3g17660.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp4g00200.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Mp7g06550.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp7g17200.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c11_1790V3.1	No alias	WRKY DNA-binding protein 48	0.02	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Smo147026	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Smo29146	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Smo66769	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Smo81371	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc01g079360.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc01g095100.4.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc01g095630.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc03g007380.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc03g116890.3.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Solyc04g072070.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc05g007110.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Solyc05g053380.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc05g055750.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc06g048870.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g006320.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g008280.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc08g067340.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g067360.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g081610.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g082110.4.1	No alias	No annotation	0.03	Archaeplastida
Solyc09g014990.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Solyc10g009550.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g011910.4.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc12g056745.1.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e004183_P001	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e006014_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e007023_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e009708_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e016623_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019418_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e022331_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e027911_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e028832_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e031518_P004	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e031901_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e033860_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e033862_P001	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e038239_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e042185_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016597	amino acid binding	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0031406	carboxylic acid binding	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
MF	GO:0043177	organic acid binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	152	210

External Links

No external refs found!

AMTR_s00053p00025460 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation