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  5. AMTR_s00053p00046800

AMTR_s00053p00046800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.24

Description : Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana


Gene families : OG0000537 (Archaeplastida) Phylogenetic Tree(s): OG0000537_tree ,
OG_05_0000494 (LandPlants) Phylogenetic Tree(s): OG_05_0000494_tree ,
OG_06_0000330 (SeedPlants) Phylogenetic Tree(s): OG_06_0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00046800
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g65986.1 No alias Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g43790.1 No alias Probable magnesium transporter NIPA3 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g092220.3.1 No alias Probable magnesium transporter NIPA2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e021361_P002 No alias Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e027029_P001 No alias Probable magnesium transporter NIPA3 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015095 magnesium ion transmembrane transporter activity IEA Interproscan
BP GO:0015693 magnesium ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0010506 regulation of autophagy IEP Neighborhood
BP GO:0010508 positive regulation of autophagy IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031331 positive regulation of cellular catabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008521 Mg_trans_NIPA 4 300
No external refs found!