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  5. Cre11.g477850

Cre11.g477850


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).stress granule.TSN ribonuclease


Gene families : OG0003332 (Archaeplastida) Phylogenetic Tree(s): OG0003332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g477850
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.70 No alias Ribonuclease TUDOR 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cpa|evm.model.tig00021357.71 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
GSVIVT01005677001 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
MA_9800042g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c12_4000V3.1 No alias TUDOR-SN protein 1 0.02 Archaeplastida
Zm00001e022564_P001 No alias ribonuclease (TSN) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR002999 Tudor 801 918
IPR016071 Staphylococal_nuclease_OB-fold 614 733
IPR016071 Staphylococal_nuclease_OB-fold 268 384
IPR016071 Staphylococal_nuclease_OB-fold 425 549
IPR016071 Staphylococal_nuclease_OB-fold 36 144
No external refs found!