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  5. AMTR_s00053p00054600

AMTR_s00053p00054600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.29

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00054600
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00217540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00007p00156040 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00026p00106470 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00026p00201250 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00047p00228080 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00062p00072320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00068p00058140 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00080p00090430 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00088p00180620 No alias No description available 0.04 Archaeplastida
AMTR_s00090p00174240 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00163p00017620 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 25 56
No external refs found!