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  5. AMTR_s00053p00069740

AMTR_s00053p00069740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.36

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter


Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000363 (LandPlants) Phylogenetic Tree(s): OG_05_0000363_tree ,
OG_06_0001693 (SeedPlants) Phylogenetic Tree(s): OG_06_0001693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00069740
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00174380 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.03 Archaeplastida
Cpa|evm.model.tig00000681.7 No alias ABC transporter C family member 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_35587 No alias ABC transporter C family member 5 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g08560.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_10434414g0010 No alias ABC transporter C family member 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.02 Archaeplastida
Pp3c21_7530V3.1 No alias multidrug resistance-associated protein 5 0.02 Archaeplastida
Smo81581 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Zm00001e006905_P001 No alias subfamily ABCC transporter 0.02 Archaeplastida
Zm00001e036442_P001 No alias subfamily ABCC transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1267 1391
IPR003439 ABC_transporter-like 673 783
No external refs found!