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  5. Cre12.g483700

Cre12.g483700


Description : Cell cycle.organelle machineries.DNA replication.single-stranded DNA (ssDNA) maintenance.OSB-type ssDNA-binding protein


Gene families : OG0001359 (Archaeplastida) Phylogenetic Tree(s): OG0001359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g483700
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G47720 OSB1 Primosome PriB/single-strand DNA-binding 0.01 Archaeplastida
LOC_Os01g72049.1 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 Archaeplastida
LOC_Os03g43420.1 No alias ssDNA-binding protein (OSB) 0.01 Archaeplastida
Pp3c21_1470V3.1 No alias plastid transcriptionally active 9 0.01 Archaeplastida
Solyc09g007430.1.1 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 Archaeplastida
Zm00001e028330_P001 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!