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  5. Cre12.g484050

Cre12.g484050


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG0002126 (Archaeplastida) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g484050
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00248470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AMTR_s00012p00174520 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
AMTR_s00012p00179170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
AT2G37600 No alias Ribosomal protein L36e family protein 0.23 Archaeplastida
AT3G53740 No alias Ribosomal protein L36e family protein 0.33 Archaeplastida
AT5G02450 No alias Ribosomal protein L36e family protein 0.36 Archaeplastida
Cpa|evm.model.tig00021493.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 Archaeplastida
GSVIVT01026914001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 Archaeplastida
GSVIVT01028917001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
Gb_10248 No alias component RPL36 of LSU proteome component 0.17 Archaeplastida
Gb_27261 No alias component RPL36 of LSU proteome component 0.15 Archaeplastida
LOC_Os01g62350.1 No alias component RPL36 of LSU proteome component 0.18 Archaeplastida
LOC_Os05g38520.1 No alias component RPL36 of LSU proteome component 0.27 Archaeplastida
MA_10430792g0010 No alias component RPL36 of LSU proteome component 0.19 Archaeplastida
MA_24782g0010 No alias component RPL36 of LSU proteome component 0.11 Archaeplastida
MA_69756g0010 No alias component RPL36 of LSU proteome component 0.06 Archaeplastida
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.36 Archaeplastida
Pp3c14_19960V3.1 No alias Ribosomal protein L36e family protein 0.4 Archaeplastida
Pp3c1_32310V3.1 No alias Ribosomal protein L36e family protein 0.18 Archaeplastida
Pp3c2_9650V3.1 No alias Ribosomal protein L36e family protein 0.39 Archaeplastida
Smo267958 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Smo439710 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Solyc01g094560.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc03g025520.4.1 No alias component RPL36 of LSU proteome component 0.11 Archaeplastida
Solyc06g036050.4.1 No alias component RPL36 of LSU proteome component 0.1 Archaeplastida
Zm00001e027238_P001 No alias component RPL36 of LSU proteome component 0.29 Archaeplastida
Zm00001e031832_P002 No alias component RPL36 of LSU proteome component 0.19 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 4 98
No external refs found!