AMTR_s00053p00085940 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.43

Description : Endoglucanase OS=Phaseolus vulgaris

Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0002563 (SeedPlants) Phylogenetic Tree(s): OG_06_0002563_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00053p00085940
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
AT2G32990	AtGH9B8, GH9B8	glycosyl hydrolase 9B8	0.02	Archaeplastida
AT2G44540	AtGH9B9, GH9B9	glycosyl hydrolase 9B9	0.02	Archaeplastida
AT4G09740	GH9B14, AtGH9B14	glycosyl hydrolase 9B14	0.02	Archaeplastida
AT4G39000	GH9B17, AtGH9B17	glycosyl hydrolase 9B17	0.03	Archaeplastida
LOC_Os08g29770.1	No alias	Endoglucanase 20 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10241783g0010	No alias	Endoglucanase 5 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	36	483

External Links

No external refs found!